Unexpected connections discovered within the cell’s energy machinery

In a recent study published in Nature Communications, researchers at Karolinska Institutet report that the molecular machinery responsible for cellular energy conversion is more interconnected than previously understood, shedding light on how mitochondria adapt under stress.

Headshot.

Nils-Göran Larsson, Professor.
Photo: Leona Rohrbeck

Mitochondria generate most of the cell’s energy by converting nutrients into ATP, the molecule that powers nearly all cellular processes. Although ATP synthase and metabolic pathways such as the tricarboxylic acid (TCA) cycle have long been known to work together, they have generally been viewed as separate systems.

Physical interactions revealed

In the new study, researchers at Karolinska Institutet, together with Professor Albert Heck’s group at Utrecht University, used advanced proteomics to map interactions in heart mitochondria. They found that ATP synthase physically associates with several enzymes of the TCA cycle.

“Using advanced proteomics approaches, we found that ATP synthase physically associates with several TCA cycle enzymes in heart mitochondria,” says Nils-Göran Larsson , professor at the Department of Medical Biochemistry and Biophysics, Karolinska Institutet, and one of the corresponding authors. “This suggests that energy conversion and metabolism are more closely coordinated than previously thought.”

Jelena Misic, MBB

Jelena Misic.
Photo: N/A

Changes during mitochondrial stress

The team also examined what happens when mitochondrial gene expression is impaired. In mouse models, this led to substantial remodelling of ATP synthase and stronger interactions with metabolic enzymes. At the same time, the inhibitory protein ATIF1 became more closely associated with ATP synthase, which may help cells conserve energy.

“We found that ATP synthase does not operate in isolation but adapts its interactions when mitochondrial function is impaired,” says Jelena Misic , postdoctoral researcher at the Department of Medical Biochemistry and Biophysics, Karolinska Institutet, and one of the first authors of the study.

New insight into disease mechanisms

The findings provide new insight into how mitochondria reorganise their molecular machinery in response to bioenergetic stress. A better understanding of these adaptive changes may help researchers uncover the mechanisms underlying mitochondrial diseases.

Publication

Investigating the relationship between ATP synthase and the TCA cycle by crosslinking mass spectrometry.

Pérez Pañeda L, Misic J, Kadavá T, Larsson NG, Heck AJR

Nat Commun 2026 Jun;17(1):

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